Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_939

Experiment: Sorted Low BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9307 and 9308 are separated by 233 nucleotides mRNA_939: 9307 - Hypothetical Protein, at 23,746 to 25,185 9307 mRNA_940: 9308 - Hypothetical Protein, at 25,419 to 26,964 9308

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
remove
22,914 - +0.9
22,920 - -2.7
22,925 + +0.6
22,928 + +0.4
22,947 - -1.4
23,066 + +0.7
23,068 + -0.9
23,157 + +0.5
23,189 - +0.2
23,215 - -0.5
23,216 + -0.3
23,216 + -1.3
23,373 + +0.6
23,374 - +0.6
23,379 - -0.6
23,385 + -2.3
23,406 + -1.6
23,475 - +0.1
23,482 + -1.3
23,528 - -0.4
23,534 + +2.5
23,647 + -2.1
23,753 + +0.9
23,774 - +0.2
23,963 - 9307 mRNA_939 0.15 -0.8
23,985 - 9307 mRNA_939 0.17 +1.3
24,006 - 9307 mRNA_939 0.18 +0.5
24,048 + 9307 mRNA_939 0.21 +0.1
24,054 + 9307 mRNA_939 0.21 +0.9
24,106 + 9307 mRNA_939 0.25 -1.1
24,151 - 9307 mRNA_939 0.28 +0.4
24,218 + 9307 mRNA_939 0.33 +0.2
24,394 + 9307 mRNA_939 0.45 +1.8
24,408 - 9307 mRNA_939 0.46 -4.4
24,487 + 9307 mRNA_939 0.51 -0.0
24,538 - 9307 mRNA_939 0.55 -0.3
24,633 + 9307 mRNA_939 0.62 +2.0
24,682 - 9307 mRNA_939 0.65 +0.5
24,763 + 9307 mRNA_939 0.71 -0.9
24,807 + 9307 mRNA_939 0.74 -0.4
24,928 + 9307 mRNA_939 0.82 -1.2
24,976 - 9307 mRNA_939 0.85 +1.1
25,080 - -1.3
25,109 - -0.8
25,206 + -0.0
25,346 - +0.2
25,350 + -2.1
25,432 + -0.1
25,445 + +0.3
25,484 - +0.6
25,486 - +0.6
25,492 + -0.4
25,673 - 9308 mRNA_940 0.16 -0.8
25,673 - 9308 mRNA_940 0.16 -0.1
25,709 - 9308 mRNA_940 0.19 +1.0
25,836 + 9308 mRNA_940 0.27 -0.8
25,839 - 9308 mRNA_940 0.27 -2.7
25,876 - 9308 mRNA_940 0.30 +0.4
26,089 - 9308 mRNA_940 0.43 -0.3
26,104 + 9308 mRNA_940 0.44 -1.2
26,116 + 9308 mRNA_940 0.45 +1.8

Or see this region's nucleotide sequence