Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1083

Experiment: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9450 and 9451 are separated by 559 nucleotides mRNA_1082: 9450 - Hypothetical Protein, at 368,387 to 368,641 9450 mRNA_1083: 9451 - Hypothetical Protein, at 369,201 to 370,313 9451

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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368,302 - +1.1
368,310 - +0.2
368,331 + -0.7
368,438 - 9450 mRNA_1082 0.20 -1.1
368,439 - 9450 mRNA_1082 0.20 +0.0
368,472 - 9450 mRNA_1082 0.33 -1.1
368,473 - 9450 mRNA_1082 0.34 +0.1
368,505 - 9450 mRNA_1082 0.46 +0.4
368,568 + 9450 mRNA_1082 0.71 +0.3
368,581 - 9450 mRNA_1082 0.76 -1.1
368,608 - 9450 mRNA_1082 0.87 -1.3
368,611 - 9450 mRNA_1082 0.88 +0.5
368,613 + 9450 mRNA_1082 0.89 -1.5
368,649 + -0.5
368,770 + -0.6
368,771 + +1.1
369,221 - +0.2
369,237 + -0.3
369,341 - 9451 mRNA_1083 0.13 -2.6
369,753 - 9451 mRNA_1083 0.50 -0.4
370,476 - -1.8
370,480 + -3.4
370,502 + +2.4
370,621 + -0.4
370,623 + +0.1
370,624 + +1.4
370,638 + -0.1
370,772 - +0.6
370,777 + -2.1
370,794 - -1.0
370,802 + +0.6
370,946 + -0.1
371,219 - +1.5
371,228 + +0.6
371,244 + -2.9

Or see this region's nucleotide sequence