Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1096

Experiment: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9463 and 9464 are separated by 80 nucleotides mRNA_1095: 9463 - KOG2741 Dimeric dihydrodiol dehydrogenase, at 395,816 to 397,150 9463 mRNA_1096: 9464 - KOG1611 Predicted short chain-type dehydrogenase, at 397,231 to 398,090 9464

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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396,539 - 9463 mRNA_1095 0.54 +2.1
396,955 - 9463 mRNA_1095 0.85 -0.4
397,100 + -0.3
397,134 - -2.1
397,290 + -0.1
397,510 - 9464 mRNA_1096 0.32 +0.2
397,788 + 9464 mRNA_1096 0.65 -2.7
397,992 + 9464 mRNA_1096 0.88 -1.0
398,220 + -1.6
398,254 - -0.4
398,260 - +0.4
398,302 + -0.1
398,386 - -0.2
398,406 - +1.1
398,559 - -0.8
398,565 - +3.1
398,699 + +0.0
398,706 - -0.0
398,707 - -0.1
398,709 - +0.1
398,715 - -0.9
398,718 - -0.7
398,726 - -1.8
398,734 + -1.8
398,864 - +0.2
398,870 - +1.6
398,902 + +0.3
398,912 + -1.1
399,011 + -1.2

Or see this region's nucleotide sequence