Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1302

Experiment: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9669 and 9670 are separated by 296 nucleotides mRNA_1301: 9669 - K06947 GRC3, NOL9 polynucleotide 5'-hydroxyl-kinase GRC3/NOL9, at 864,928 to 866,257 9669 mRNA_1302: 9670 - Hypothetical Protein, at 866,554 to 866,811 9670

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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866,339 + +1.6
866,340 - +1.7
866,364 + -2.8
866,395 + +0.7
866,457 + -1.5
866,657 - 9670 mRNA_1302 0.40 -0.5
866,701 - 9670 mRNA_1302 0.57 -1.8
866,794 + -0.8
866,851 - -1.4
866,859 + -0.1
866,863 - -0.6
866,895 + -0.2
866,900 + -1.0
866,921 + +0.3
866,953 - -0.7
866,954 - +0.4
866,955 - -0.7
866,969 - +0.3
866,969 + +1.8
867,045 + +0.9
867,051 + -0.1
867,052 - -1.7
867,066 - +0.8
867,066 - -0.3
867,070 - +0.0
867,073 - +0.2
867,133 + -0.2
867,133 + -0.2
867,136 - +1.6
867,140 + -1.7
867,143 - -0.4
867,152 + -1.9
867,154 - +0.3
867,160 - +0.9
867,242 - -2.3
867,307 - -5.0
867,321 - -0.6
867,334 - -1.1
867,623 - -1.7
867,643 - -1.7

Or see this region's nucleotide sequence