Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1320

Experiment: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9688 and 9689 are separated by 872 nucleotides mRNA_1320: 9688 - K00384 trxB thioredoxin reductase (NADPH), at 921,443 to 923,748 9688 mRNA_1321: 9689 - K01687 ilvD dihydroxy-acid dehydratase, at 924,621 to 927,018 9689

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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920,784 + -0.2
921,063 + -0.6
923,535 + +1.6
923,550 + -1.4
923,664 - -1.1
923,669 + +0.2
923,681 - +1.2
923,684 + -1.1
923,688 + -1.7
923,691 - +1.0
923,699 - -0.7
923,699 - -1.5
923,704 - -2.8
923,705 - +0.2
923,709 + -0.6
923,709 + -2.8
923,710 + -1.2
923,724 + -1.4
923,817 + -0.2
923,916 - -0.5
923,925 - +0.6
923,930 - +0.0
923,939 - -2.3
923,943 + -1.4
923,950 + -0.5
923,955 + +0.2
923,963 + -2.7
923,964 + -1.4
923,970 - -1.3
923,970 - -1.2
923,975 + +0.5
923,979 - +0.0
924,100 + -1.4
924,163 + -0.2
924,251 - -0.5

Or see this region's nucleotide sequence