Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1604

Experiment: Sorted Low BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9971 and 9972 are separated by 143 nucleotides9972 and 9973 are separated by 94 nucleotides mRNA_1603: 9971 - KOG2948 Predicted metal-binding protein, at 699,316 to 700,594 9971 mRNA_1604: 9972 - K02209 MCM5, CDC46 DNA replication licensing factor MCM5, at 700,738 to 703,638 9972 mRNA_1605: 9973 - Hypothetical Protein, at 703,733 to 704,608 9973

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
remove
700,742 + -0.4
703,692 - -2.1
703,707 - +0.6
703,708 - -0.8
703,716 - +0.5
703,738 + +0.3
703,754 + -0.9
703,854 - 9973 mRNA_1605 0.14 +0.1
703,875 + 9973 mRNA_1605 0.16 -1.3
704,175 - 9973 mRNA_1605 0.50 -0.0
704,288 + 9973 mRNA_1605 0.63 -2.2
704,464 - 9973 mRNA_1605 0.83 -2.5
704,584 - -1.6
704,592 + +0.0

Or see this region's nucleotide sequence