Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2068

Experiment: Sorted High BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10435 and 10436 are separated by 171 nucleotides mRNA_2067: 10435 - BLAST cell morphogenesis protein [Grosmannia clavigera ..., at 868,963 to 869,751 10435 mRNA_2068: 10436 - Hypothetical Protein, at 869,923 to 870,194 10436

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
remove
868,932 - +0.0
868,957 - +1.6
868,974 + +0.4
868,980 - -0.6
868,983 - +0.3
869,027 - -1.6
869,097 + 10435 mRNA_2067 0.17 -1.4
869,174 + 10435 mRNA_2067 0.27 +0.9
869,210 - 10435 mRNA_2067 0.31 +0.0
869,232 + 10435 mRNA_2067 0.34 +0.1
869,239 - 10435 mRNA_2067 0.35 -0.6
869,248 - 10435 mRNA_2067 0.36 -0.2
869,360 - 10435 mRNA_2067 0.50 +0.8
869,379 - 10435 mRNA_2067 0.53 -0.8
869,379 - 10435 mRNA_2067 0.53 -1.2
869,385 + 10435 mRNA_2067 0.53 +0.2
869,405 - 10435 mRNA_2067 0.56 +1.4
869,405 - 10435 mRNA_2067 0.56 -1.0
869,406 + 10435 mRNA_2067 0.56 -2.1
869,493 - 10435 mRNA_2067 0.67 -0.2
869,524 - 10435 mRNA_2067 0.71 -1.8
869,540 - 10435 mRNA_2067 0.73 -1.1
869,591 - 10435 mRNA_2067 0.80 -3.4
869,620 - 10435 mRNA_2067 0.83 +0.6
869,624 - 10435 mRNA_2067 0.84 -2.1
869,629 - 10435 mRNA_2067 0.84 -0.6
869,641 - 10435 mRNA_2067 0.86 -2.6
869,651 - 10435 mRNA_2067 0.87 +1.2
869,689 - -1.8
869,714 + -2.1
869,721 - -0.8
869,758 - -0.4
869,758 + -1.7
869,771 - -3.2
869,775 - -0.8
869,795 - -0.2
869,864 - +0.6
869,866 - -0.0
869,877 - -1.2
869,881 - -0.2
869,903 - -0.3
869,904 - +0.7
869,908 - -0.5
869,923 - -0.2
869,942 - -0.3
869,943 - -1.1
869,948 - -0.2
869,964 + 10436 mRNA_2068 0.15 -0.6
869,966 - 10436 mRNA_2068 0.16 -0.0
869,990 + 10436 mRNA_2068 0.25 +0.4
869,990 + 10436 mRNA_2068 0.25 -0.1
869,990 - 10436 mRNA_2068 0.25 -0.7
870,004 - 10436 mRNA_2068 0.30 -1.0
870,012 + 10436 mRNA_2068 0.33 -1.1
870,033 - 10436 mRNA_2068 0.40 +0.2
870,035 - 10436 mRNA_2068 0.41 -1.8
870,042 - 10436 mRNA_2068 0.44 +1.0
870,044 + 10436 mRNA_2068 0.44 +0.1
870,054 + 10436 mRNA_2068 0.48 -2.1
870,056 - 10436 mRNA_2068 0.49 -1.3
870,058 - 10436 mRNA_2068 0.50 -0.1
870,061 - 10436 mRNA_2068 0.51 -4.9
870,070 - 10436 mRNA_2068 0.54 -0.6
870,086 - 10436 mRNA_2068 0.60 +1.7
870,086 - 10436 mRNA_2068 0.60 -0.5
870,093 + 10436 mRNA_2068 0.62 +2.4
870,107 - 10436 mRNA_2068 0.68 -0.4
870,112 + 10436 mRNA_2068 0.69 -0.0
870,127 - 10436 mRNA_2068 0.75 -1.2
870,145 - 10436 mRNA_2068 0.82 -2.7
870,148 - 10436 mRNA_2068 0.83 +0.7
870,158 - 10436 mRNA_2068 0.86 -0.2
870,171 + +0.8
870,172 - -2.3
870,172 - -2.3
870,172 - +0.9
870,172 - -1.1
870,173 + +0.5
870,173 + -0.4
870,176 - +0.3
870,180 - -0.7
870,192 - -0.8
870,205 - -0.6
870,210 - +0.0
870,210 - +1.0
870,210 - +0.1
870,210 - -0.1
870,210 - -0.2

Or see this region's nucleotide sequence