Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2074

Experiment: Sorted High BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10441 and 10442 are separated by 302 nucleotides mRNA_2073: 10441 - Hypothetical Protein, at 8,998 to 9,576 10441 mRNA_2074: 10442 - HMMPfam-Chromate transporter-PF02417, at 9,879 to 11,848 10442

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
remove
8,884 - -2.1
8,887 + +1.1
8,889 + -1.5
8,899 - +1.5
8,902 + +0.2
8,904 + +0.5
9,068 - 10441 mRNA_2073 0.12 -0.0
9,479 + 10441 mRNA_2073 0.83 +1.1
9,483 - 10441 mRNA_2073 0.84 -0.0
9,487 - 10441 mRNA_2073 0.84 +0.9
9,623 + -0.6
9,739 - -1.0
9,785 - +0.4
9,788 - +0.5
9,788 - -1.3
9,936 + +0.2
10,090 - 10442 mRNA_2074 0.11 +0.3
10,272 + 10442 mRNA_2074 0.20 +0.9
11,852 - -1.6
12,047 + -0.9
12,269 - -0.1
12,274 + -0.9
12,274 - -1.5
12,281 - -1.8
12,287 + -0.3
12,292 + -0.5
12,420 + +0.0
12,431 + -0.5
12,581 - +0.3

Or see this region's nucleotide sequence