Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2287

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10654 and 10655 are separated by 943 nucleotides mRNA_2286: 10654 - Hypothetical Protein, at 528,229 to 530,268 10654 mRNA_2287: 10655 - KOG3870 Uncharacterized conserved protein, at 531,212 to 533,990 10655

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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530,363 - +2.1
530,368 - -1.4
530,372 + +2.2
530,391 + +2.1
530,486 - -0.7
530,562 - -1.3
530,575 + +0.3
530,592 - +0.0
530,601 + -1.0
530,610 + -0.8
530,613 - +0.3
530,639 - -2.7
530,639 + -0.7
530,652 + +0.2
530,678 + +0.7
530,684 + -0.4
530,708 + +0.4
530,714 + -1.2
530,714 + +0.1
530,726 - +0.8
530,727 - -1.2
530,727 + -0.5
530,728 + +0.7
530,771 - +0.6
530,824 - -0.3
530,835 + -0.1
530,840 - +0.5
530,898 + -0.5
530,899 - +0.5
530,900 - -0.3
530,900 - +0.5
530,904 + +0.0
530,904 + +0.4
530,904 - -0.5
530,905 + -1.7
530,911 - +0.5
530,914 + -2.7
530,923 + +0.3
530,923 - -1.2
530,923 + +0.5
530,923 - +0.6
530,928 - -0.6
530,929 + +0.3
530,929 + -0.1
530,930 + +0.1
530,932 - -0.1
530,933 + -1.4
530,934 - -0.0
530,939 - +0.1
530,944 + -2.5
530,945 + -1.0
530,945 + +0.3
530,952 - -1.3
530,958 + -0.1
530,959 + -0.9
530,961 - +0.9
530,967 + -0.1
531,036 + +0.8
531,059 - -0.8
531,061 + -1.8
531,070 - -0.4
531,097 + -0.0
531,101 - -1.3
531,109 + +0.6
531,117 + +0.5
531,117 - +0.5
531,121 + -0.1
531,126 + -1.0
531,129 + -0.5
531,132 + +0.5
531,199 - +1.4
531,261 + -0.3
531,264 - -1.3
531,274 + +0.3
531,280 + +0.2
531,411 - +0.5
531,418 - +0.3
531,420 - +0.5
531,446 + -0.1
532,015 + 10655 mRNA_2287 0.29 -0.1
532,026 - 10655 mRNA_2287 0.29 -0.8
532,430 + 10655 mRNA_2287 0.44 -1.1
532,434 + 10655 mRNA_2287 0.44 -0.2
532,462 - 10655 mRNA_2287 0.45 -2.7
532,590 - 10655 mRNA_2287 0.50 +0.3
532,760 - 10655 mRNA_2287 0.56 +0.2
532,878 + 10655 mRNA_2287 0.60 -1.1
533,307 + 10655 mRNA_2287 0.75 +0.1
533,727 + +1.4
533,733 + -0.2
533,734 - +0.1
533,891 - +0.4
534,036 + -0.6
534,784 + -0.1

Or see this region's nucleotide sequence