Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2320

Experiment: Sorted High BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_2320: 10688 - HMMPfam-Carboxylesterase family-PF00135,SUPERFAMILY--SSF53474, at 599,987 to 602,471 10688

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
remove
599,148 - -0.9
599,154 - +0.7
599,154 + +0.1
599,178 - +0.7
599,316 - +0.1
599,317 + +0.2
599,321 - -0.8
599,463 - -1.7
599,868 - -1.3
599,890 + -1.5
599,902 - +0.2
599,905 + -0.6
599,909 + +1.6
600,029 + -0.7
600,064 - -0.7
600,482 - 10688 mRNA_2320 0.20 +0.4
601,187 + 10688 mRNA_2320 0.48 +0.1
601,342 - 10688 mRNA_2320 0.55 -0.7
601,409 + 10688 mRNA_2320 0.57 +0.2
601,636 - 10688 mRNA_2320 0.66 +0.8
601,639 + 10688 mRNA_2320 0.66 +1.6
602,175 - 10688 mRNA_2320 0.88 -1.1
602,188 + 10688 mRNA_2320 0.89 +0.7
602,209 - 10688 mRNA_2320 0.89 +0.2
602,218 + 10688 mRNA_2320 0.90 -1.0
602,497 + +0.7
602,665 + +0.2
602,674 - -0.5
602,700 - -2.6
602,705 + -2.2
602,861 + -2.7
603,251 - -1.4

Or see this region's nucleotide sequence