Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2370

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10737 and 10738 are separated by 551 nucleotides10738 and 10739 are separated by 20 nucleotides mRNA_2369: 10737 - K02997 RP-S9e, RPS9 small subunit ribosomal protein S9e, at 730,556 to 731,871 10737 mRNA_2370: 10738 - K01410 MIPEP mitochondrial intermediate peptidase, at 732,423 to 734,982 10738 mRNA_2371: 10739 - BLAST Tubulin beta-2 chain [Grifola frondosa], at 735,003 to 736,788 10739

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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732,022 + -0.5
732,053 + +1.1
732,170 - -1.4
732,340 - +0.7
732,343 + +0.6
735,011 + +0.8
735,457 + 10739 mRNA_2371 0.25 +0.5

Or see this region's nucleotide sequence