Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2384

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10751 and 10752 are separated by 19 nucleotides10752 and 10753 are separated by 279 nucleotides mRNA_2383: 10751 - Hypothetical Protein, at 762,665 to 764,140 10751 mRNA_2384: 10752 - K11600 RRP41, EXOSC4, SKI6 exosome complex component RRP41, at 764,160 to 765,511 10752 mRNA_2385: 10753 - K01885 EARS, gltX glutamyl-tRNA synthetase, at 765,791 to 769,298 10753

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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763,299 - 10751 mRNA_2383 0.43 +0.8
763,326 - 10751 mRNA_2383 0.45 -2.6
763,497 + 10751 mRNA_2383 0.56 -0.8
763,651 - 10751 mRNA_2383 0.67 +1.3
763,803 + 10751 mRNA_2383 0.77 +0.9
763,931 - 10751 mRNA_2383 0.86 +0.1
763,945 + 10751 mRNA_2383 0.87 +0.5
764,097 + -0.1
764,112 - -0.7
765,696 + -1.0

Or see this region's nucleotide sequence