Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2467

Experiment: Sorted High BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_2467: 10835 - Hypothetical Protein, at 216,514 to 218,202 10835

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
remove
215,542 - +0.4
215,638 - -0.7
215,662 + +0.8
215,668 - +1.6
216,081 + -1.8
216,117 - -0.3
216,141 - +0.3
216,168 + +0.9
216,282 - -1.6
216,293 + -1.5
216,297 + -1.8
216,298 + +0.2
216,302 - +0.7
216,403 - -0.3
216,409 - +0.2
216,446 + -0.7
216,450 + -0.3
216,543 + -2.8
216,562 - -1.7
216,564 - -0.6
216,595 - -1.1
217,721 + 10835 mRNA_2467 0.71 -1.2
217,727 + 10835 mRNA_2467 0.72 +0.2
217,998 + 10835 mRNA_2467 0.88 -1.0
218,001 + 10835 mRNA_2467 0.88 -0.9
218,037 - -1.6
218,120 - -2.1
218,130 + -0.6
218,133 - -1.2
218,137 - +0.1
218,160 + -0.1
218,198 + -0.4
218,261 + -4.0
218,280 + -0.6
218,282 + +0.8
218,287 + -0.7
218,288 - -0.2
218,289 + -1.0
218,295 + -0.7
218,302 + -0.8
218,306 - +0.8
218,306 - +0.4
218,308 + -1.4
218,340 - -0.9
218,343 - -1.2
218,343 + -0.6
218,344 - -0.4
218,350 - -2.3
218,361 - +0.4
218,367 - -1.0
218,392 + -1.5
218,427 - -0.9
218,456 + +0.2
218,482 - +0.8
218,506 + -2.6
218,507 - -2.1
218,561 + +0.7
218,561 + -1.0
218,570 + -1.3
218,573 + +0.0
218,594 + -0.4
218,609 - +0.6
218,642 - +0.4
218,651 + +0.5
218,657 - -0.9
218,659 + -0.9
218,671 - +0.3
218,677 - +0.6
218,747 - +1.5
218,766 - -2.3
218,788 - +0.3
218,794 - +2.0
218,802 + +0.3
218,817 - -0.2
218,830 + +0.4
218,924 - +1.5
218,926 + -3.3
218,947 - +0.9
218,951 - -0.4
218,952 - -1.2
218,954 - -1.3
218,961 - -0.8
218,962 - +1.0
218,969 + -0.5
219,087 - +0.5

Or see this region's nucleotide sequence