Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2470

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10837 and 10838 are separated by 406 nucleotides mRNA_2469: 10837 - K12479 VPS45 vacuolar protein sorting-associated protein 45, at 220,878 to 223,726 10837 mRNA_2470: 10838 - K06659 CLB3_4 G2/mitotic-specific cyclin 3/4, at 224,133 to 225,151 10838

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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223,533 + +0.2
223,535 - -0.2
223,667 + -0.7
223,696 + -0.4
223,846 - +0.0
223,966 - +0.3

Or see this region's nucleotide sequence