Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2560

Experiment: Sorted High BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10927 and 10928 are separated by 653 nucleotides mRNA_2559: 10927 - HMMPfam-Translin family-PF01997,SUPERFAMILY--SSF74784, at 441,201 to 442,474 10927 mRNA_2560: 10928 - Hypothetical Protein, at 443,128 to 444,142 10928

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
remove
442,679 + +0.1
442,759 - -0.9
442,765 + -1.5
442,852 - +0.4
442,983 - +1.6
443,070 + -0.5
443,223 - +0.1
443,336 - 10928 mRNA_2560 0.20 +2.1
443,388 + 10928 mRNA_2560 0.26 -0.2
443,414 - 10928 mRNA_2560 0.28 -0.9
443,642 - 10928 mRNA_2560 0.51 -1.6
443,650 + 10928 mRNA_2560 0.51 -0.5
443,823 - 10928 mRNA_2560 0.68 -1.1
443,939 - 10928 mRNA_2560 0.80 -0.8
443,942 + 10928 mRNA_2560 0.80 -1.2
444,401 - -1.2
444,623 + -3.5
444,631 - -1.3
444,708 - -2.1
444,799 - -1.1
444,820 - +0.4
444,834 - +0.5
444,882 - +0.4
444,944 + +0.4
444,975 - +0.5
445,002 - +0.8
445,081 - -2.3
445,094 - +0.1
445,111 - -0.3
445,116 - -0.1
445,120 - -0.0

Or see this region's nucleotide sequence