Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2674

Experiment: Sorted High BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11041 and 11042 are separated by 454 nucleotides mRNA_2673: 11041 - K10844 ERCC2, XPD DNA excision repair protein ERCC-2, at 734,339 to 738,341 11041 mRNA_2674: 11042 - Hypothetical Protein, at 738,796 to 742,591 11042

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
remove
737,976 + +1.2
738,074 + -0.6
738,088 + -1.3
738,155 + +0.8
738,378 - -1.9
738,478 + -0.5
738,523 - -2.2
738,572 + -0.7
738,595 + -1.0
738,710 + -1.7
738,837 - +0.0
738,876 + -0.2
738,965 - -0.0
739,086 + -1.8
739,136 + -0.7
739,228 + 11042 mRNA_2674 0.11 -0.4
739,245 - 11042 mRNA_2674 0.12 +0.5
739,265 - 11042 mRNA_2674 0.12 -1.4
739,588 + 11042 mRNA_2674 0.21 +0.1
739,601 + 11042 mRNA_2674 0.21 -0.5
739,857 + 11042 mRNA_2674 0.28 +0.3
739,999 - 11042 mRNA_2674 0.32 -0.5
740,008 + 11042 mRNA_2674 0.32 -0.7
740,012 + 11042 mRNA_2674 0.32 +0.4
740,294 + 11042 mRNA_2674 0.39 -0.1
740,456 + 11042 mRNA_2674 0.44 +0.6
740,459 + 11042 mRNA_2674 0.44 +0.5
740,503 - 11042 mRNA_2674 0.45 -0.8
740,585 - 11042 mRNA_2674 0.47 -1.3
741,123 + 11042 mRNA_2674 0.61 -0.4
741,149 + 11042 mRNA_2674 0.62 -1.3
741,195 - 11042 mRNA_2674 0.63 -1.1
741,199 + 11042 mRNA_2674 0.63 -0.5
741,279 - 11042 mRNA_2674 0.65 -0.0
741,289 - 11042 mRNA_2674 0.66 +0.2
741,435 - 11042 mRNA_2674 0.70 -1.8
741,481 - 11042 mRNA_2674 0.71 +1.0
741,519 + 11042 mRNA_2674 0.72 +0.2
741,878 + 11042 mRNA_2674 0.81 -3.6
742,326 - -1.3
742,334 - -2.5
742,338 + -0.5
742,390 - +1.0
742,638 + -0.6
742,664 - +0.0
743,026 + +0.9
743,045 - -0.4
743,048 + -0.2
743,067 + -0.3
743,223 + -1.8
743,317 - -0.2
743,354 + -0.2
743,365 - -1.0

Or see this region's nucleotide sequence