Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2914

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_2914: 11282 - Hypothetical Protein, at 529,916 to 530,782 11282

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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529,659 - +0.1
529,675 - +0.0
529,717 + -1.6
529,797 + -0.2
529,868 + +0.5
529,872 - -0.2
529,872 + -0.2
529,997 - -0.3
530,077 + 11282 mRNA_2914 0.19 +0.2
530,171 + 11282 mRNA_2914 0.29 -0.8
530,310 + 11282 mRNA_2914 0.45 -0.4
530,431 - 11282 mRNA_2914 0.59 -2.1
530,442 + 11282 mRNA_2914 0.61 -0.8
530,451 + 11282 mRNA_2914 0.62 -1.7
530,711 - -0.9
530,749 + -0.3
530,856 - -0.5
531,023 + +0.2
531,026 + +0.0
531,028 + -2.5
531,047 + -2.8
531,048 + +0.0
531,059 + +0.3
531,061 + +0.4
531,199 - -0.4
531,339 - -0.7
531,348 + -0.3
531,355 + +0.6
531,358 - -1.8
531,376 - -0.2
531,379 + +0.3
531,382 + -0.0
531,569 + +0.4
531,671 + +0.1
531,676 + -2.6

Or see this region's nucleotide sequence