Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2936

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11304 and 11305 are separated by 985 nucleotides mRNA_2936: 11304 - Hypothetical Protein, at 589,318 to 590,178 11304 mRNA_2937: 11305 - K14521 NAT10, KRE33 N-acetyltransferase 10, at 591,164 to 595,198 11305

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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588,572 - +0.1
588,689 + +0.1
588,849 - -1.2
588,858 - +0.0
588,903 + -1.3
588,990 - -0.4
588,999 - -0.9
589,007 + -0.6
589,035 + -2.3
589,048 - -1.0
589,051 + -0.9
589,054 + +1.2
589,057 - -1.3
589,058 - -1.0
589,060 - +0.0
589,067 - +0.1
589,071 + +0.3
589,071 + +0.8
589,072 + -0.2
589,076 + +0.9
589,077 + +0.8
589,078 - -2.1
589,079 + -0.3
589,079 - -1.8
589,080 + -0.3
589,081 - -0.1
589,089 + -0.1
589,096 + -0.2
589,098 - -0.0
589,103 - -1.4
589,167 + +1.0
589,191 - -0.5
589,220 + -0.8
589,232 - +1.5
589,248 + -1.2
589,714 + 11304 mRNA_2936 0.46 -0.2
589,728 - 11304 mRNA_2936 0.48 -0.1
589,813 + 11304 mRNA_2936 0.57 +0.2
589,912 + 11304 mRNA_2936 0.69 -0.3
589,952 + 11304 mRNA_2936 0.74 -0.7
590,104 + +1.1
590,114 - -1.1
590,568 + +0.9
590,684 + -2.1
590,695 + -0.9
590,802 + +0.2
590,821 + +1.4
590,823 + -1.2
590,857 + -2.5
590,859 + +1.5
590,878 + +2.7
591,003 - -0.3
591,023 - -0.3
591,025 - -1.1
591,031 - -1.1

Or see this region's nucleotide sequence