Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2958

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11325 and 11326 are separated by 858 nucleotides mRNA_2957: 11325 - Hypothetical Protein, at 645,332 to 646,636 11325 mRNA_2958: 11326 - K17907 ATG9 autophagy-related protein 9, at 647,495 to 650,461 11326

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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646,603 + -0.1
646,635 + -4.4
646,744 - +1.0
646,747 + -0.1
646,821 - -0.5
646,894 - +0.9
647,166 + +1.0
647,168 - -1.5
647,213 + -1.0
647,321 - +0.5
647,607 - -0.4
647,612 - -3.6
647,612 - -0.6
647,612 - -3.2
647,612 - -3.6
647,624 - +0.0
647,635 - -1.4
647,763 - -1.4
647,767 + -3.8
648,061 + 11326 mRNA_2958 0.19 -1.0
648,241 + 11326 mRNA_2958 0.25 -1.2
648,369 - 11326 mRNA_2958 0.29 +0.0
648,509 + 11326 mRNA_2958 0.34 -0.6
648,754 - 11326 mRNA_2958 0.42 -3.1
649,221 + 11326 mRNA_2958 0.58 -3.9
649,260 + 11326 mRNA_2958 0.59 -3.5
649,369 + 11326 mRNA_2958 0.63 -5.2
649,649 - 11326 mRNA_2958 0.73 -2.9
649,652 - 11326 mRNA_2958 0.73 -0.2
650,273 + -2.1
650,377 - -5.3
650,566 + +0.2
650,688 - -0.1
651,118 + -1.6
651,134 - +0.1
651,142 + +0.0
651,289 + +0.2
651,299 + -0.2
651,386 + +0.1
651,447 + +0.0
651,450 - -1.2

Or see this region's nucleotide sequence