Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3039

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_3039: 11407 - Hypothetical Protein, at 162,195 to 163,096 11407

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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161,209 - -1.4
161,212 + -0.7
161,224 - -0.2
161,233 + -0.4
161,254 + -0.7
161,369 + -0.4
161,530 + +0.4
161,555 + +0.5
161,694 - +1.3
161,818 + -1.0
161,985 + +0.2
162,138 - -0.5
162,438 - 11407 mRNA_3039 0.27 -0.8
162,439 + 11407 mRNA_3039 0.27 -0.8
162,880 - 11407 mRNA_3039 0.76 -0.0
162,909 - 11407 mRNA_3039 0.79 +0.9
163,000 - 11407 mRNA_3039 0.89 +0.2
163,106 + +0.4
163,903 - +0.2
164,045 + -0.0

Or see this region's nucleotide sequence