Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3051

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11418 and 11419 are separated by 667 nucleotides11419 and 11420 are separated by 494 nucleotides mRNA_3050: 11418 - K14430 PHO87_91 phosphate transporter, at 193,980 to 198,261 11418 mRNA_3051: 11419 - Hypothetical Protein, at 198,929 to 201,085 11419 mRNA_3052: 11420 - KOG2404 Fumarate reductase, flavoprotein subunit, at 201,580 to 204,661 11420

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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200,483 - 11419 mRNA_3051 0.72 -1.2
200,775 - 11419 mRNA_3051 0.86 -1.0
201,924 + 11420 mRNA_3052 0.11 -1.5

Or see this region's nucleotide sequence