Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3162

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11529 and 11530 are separated by 894 nucleotides11530 and 11531 are separated by 694 nucleotides mRNA_3161: 11529 - SUPERFAMILY--SSF49899, at 455,975 to 458,012 11529 mRNA_3162: 11530 - BLAST Myc-type, basic helix-loop-helix (bHLH) domain [Xanth..., at 458,907 to 462,110 11530 mRNA_3163: 11531 - K13171 SRRM1, SRM160 serine/arginine repetitive matrix protein 1, at 462,805 to 464,662 11531
No fitness data for strains in range 457,907 to 463,110

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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Or see this region's nucleotide sequence