Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4293

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 12661 and 12662 are separated by 218 nucleotides mRNA_4293: 12661 - KOG1375 Beta tubulin, at 1,820,426 to 1,822,919 12661 mRNA_4294: 12662 - K08851 TP53RK, PRPK, BUD32 TP53 regulating kinase and related kinases, at 1,823,138 to 1,824,204 12662

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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1,819,980 + -2.3
1,820,225 + -0.9
1,820,229 - -0.0
1,820,237 - -0.6
1,820,239 + -1.1
1,820,246 + -1.1
1,820,247 - +0.2
1,820,253 + -2.3
1,820,272 + +0.5
1,820,369 - +0.4
1,820,397 - -1.0
1,822,800 + -0.4
1,822,937 + +1.4

Or see this region's nucleotide sequence