Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4542

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 12910 and 12911 are separated by 248 nucleotides mRNA_4542: 12910 - K05302 SETD6 N-lysine methyltransferase SETD6, at 420,750 to 422,529 12910 mRNA_4543: 12911 - HMMPfam-Rrp15p-PF07890, at 422,778 to 423,805 12911

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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420,106 + -0.8
420,146 + -0.0
420,262 - +0.2
420,263 + -1.1
420,263 - +0.7
420,263 + +0.5
420,277 - +1.0
420,299 + -0.5
420,377 + +0.5
421,319 + 12910 mRNA_4542 0.32 -0.0
421,469 - 12910 mRNA_4542 0.40 -3.4
422,039 + 12910 mRNA_4542 0.72 -0.3
422,313 - 12910 mRNA_4542 0.88 -1.6
422,375 - +0.4
422,384 - +0.5
422,526 - -0.1
422,609 + +0.1
422,660 + +0.2
422,661 - -0.3
422,662 + -0.8
422,669 - +0.6
422,675 + +0.8

Or see this region's nucleotide sequence