Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4657

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13024 and 13025 are separated by 345 nucleotides13025 and 13026 are separated by 444 nucleotides mRNA_4656: 13024 - Hypothetical Protein, at 702,586 to 704,357 13024 mRNA_4657: 13025 - Hypothetical Protein, at 704,703 to 705,380 13025 mRNA_4658: 13026 - Hypothetical Protein, at 705,825 to 708,792 13026

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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703,814 + 13024 mRNA_4656 0.69 +0.0
703,958 + 13024 mRNA_4656 0.77 -0.2
703,960 + 13024 mRNA_4656 0.78 +0.1
704,411 - -3.0
704,422 - -1.3
704,548 - -0.3
704,559 - -0.1
704,562 + -0.6
704,569 - -2.0
704,580 + -1.5
704,848 + 13025 mRNA_4657 0.21 -0.6
705,128 - 13025 mRNA_4657 0.63 -0.2
705,134 + 13025 mRNA_4657 0.64 -1.7
705,148 - 13025 mRNA_4657 0.66 -0.8
705,160 + 13025 mRNA_4657 0.67 -0.9
705,565 - +0.8
705,580 - -0.2
705,580 + -0.8
705,584 + -1.9
705,585 + -0.7
705,585 + -2.0
705,586 - +0.2
705,618 + -4.9
705,626 + +0.1
705,705 + +0.6
705,709 - -0.2
705,724 - -0.4
705,746 + +0.1
705,752 - +0.7
705,804 - -0.9
705,842 - +1.8
705,865 + -0.0
705,865 + -0.1
705,873 + -0.4
706,034 - +0.1
706,139 + 13026 mRNA_4658 0.11 +0.7
706,158 - 13026 mRNA_4658 0.11 -0.2
706,177 + 13026 mRNA_4658 0.12 +1.9
706,328 + 13026 mRNA_4658 0.17 +2.1

Or see this region's nucleotide sequence