Experiment: Sorted High BODIPY Gate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertions' strand.
Conventionally, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt
13296 and 13297 are separated by 564 nucleotides 13297 and 13298 are separated by 326 nucleotides
mRNA_4928: 13296 - HMMPfam-Transient receptor potential (TRP) ion channel-PF06011,HMMPfam-ML-like domain-PF14558, at 1,337,111 to 1,340,226
13296
mRNA_4929: 13297 - K01956 carA, CPA1 carbamoyl-phosphate synthase small subunit, at 1,340,791 to 1,342,395
13297
mRNA_4930: 13298 - HMMPfam-Ubiquitin family-PF00240,HMMPfam-BAG domain-PF02179,ProSiteProfiles-Ubiquitin domain profile.-PS50053,ProSiteProfiles-BAG domain profile.-PS51035,SMART-BAG domains, present in regulator of Hsp70 proteins-SM00264,SUPERFAMILY--SSF54236,SUPERFAMILY--SSF63491, at 1,342,722 to 1,344,500
13298
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Per-strain Table Position Strand Gene Sysname Fraction Sorted High BODIPY Gate remove 1,340,268 + -1.6 1,340,289 - -0.9 1,340,301 + -0.4 1,340,322 - -0.4 1,340,333 - -0.4 1,340,340 + -0.3 1,340,341 - -0.2 1,340,342 + -0.3 1,340,361 + -1.8 1,340,479 + -0.3 1,340,482 + +0.1 1,340,486 + +0.7 1,340,492 + -0.3 1,340,493 - -1.8 1,340,516 - -1.2 1,340,520 + -2.1 1,340,547 - -0.3 1,340,628 - -0.7 1,340,662 + -0.8 1,340,987 + 13297 mRNA_4929 0.12 -2.3 1,341,206 + 13297 mRNA_4929 0.26 -2.9 1,341,668 + 13297 mRNA_4929 0.55 -3.7 1,341,673 + 13297 mRNA_4929 0.55 -4.6 1,341,675 - 13297 mRNA_4929 0.55 -2.4 1,341,922 - 13297 mRNA_4929 0.70 -1.9 1,341,926 + 13297 mRNA_4929 0.71 +1.2 1,342,181 + 13297 mRNA_4929 0.87 -0.8 1,342,247 + -1.0 1,342,359 - -3.8 1,342,492 - -2.9 1,342,494 - -0.6 1,342,494 - -3.4 1,342,498 - -0.8 1,342,511 + -4.2 1,342,624 + -0.5 1,342,651 - +0.2 1,342,655 + +0.8 1,342,662 - +0.0 1,342,663 - -0.1 1,342,663 + +0.7 1,342,673 - -0.2 1,342,677 + -0.7 1,342,680 + -1.8 1,342,708 + -0.9 1,342,774 + -0.1 1,342,797 - +1.0 1,342,799 - -0.5 1,342,801 - +2.2 1,342,804 + -0.0 1,342,807 + -2.0 1,342,810 - -0.3 1,342,817 + -0.9 1,342,820 - -0.4 1,342,824 + -0.0 1,342,825 + +0.6 1,342,826 - -0.7 1,342,836 - +2.8 1,342,862 + -0.1 1,343,004 - 13298 mRNA_4930 0.16 -0.5 1,343,147 + 13298 mRNA_4930 0.24 -1.0 1,343,153 + 13298 mRNA_4930 0.24 -2.8 1,343,262 - 13298 mRNA_4930 0.30 -1.0 1,343,262 - 13298 mRNA_4930 0.30 +0.1 1,343,285 - 13298 mRNA_4930 0.32 -1.0 1,343,296 - 13298 mRNA_4930 0.32 -1.1
Or see this region's nucleotide sequence