Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5161

Experiment: Sorted High BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13529 and 13530 are separated by 795 nucleotides mRNA_5161: 13529 - Hypothetical Protein, at 44,917 to 45,595 13529 mRNA_5162: 13530 - Hypothetical Protein, at 46,391 to 47,176 13530

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
remove
43,918 + -0.6
44,101 + +1.0
44,201 + +0.4
44,489 + -0.5
44,503 + +0.0
44,588 + +0.7
44,746 - +1.0
44,772 - +0.4
44,822 + -0.3
44,823 + -0.2
44,848 + -0.7
45,027 + 13529 mRNA_5161 0.16 -0.5
45,297 - 13529 mRNA_5161 0.56 -0.4
45,413 - 13529 mRNA_5161 0.73 -0.9
45,419 + 13529 mRNA_5161 0.74 -1.8
45,450 - 13529 mRNA_5161 0.78 -0.8
45,846 - +0.4
46,090 - -0.6
46,193 - +2.0
46,364 - -0.4
46,457 - +0.0
46,527 + 13530 mRNA_5162 0.17 +0.2
46,587 - 13530 mRNA_5162 0.25 -1.8

Or see this region's nucleotide sequence