Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5181

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13548 and 13549 are separated by 310 nucleotides13549 and 13550 are separated by 605 nucleotides mRNA_5180: 13548 - Hypothetical Protein, at 87,692 to 90,433 13548 mRNA_5181: 13549 - Hypothetical Protein, at 90,744 to 91,309 13549 mRNA_5182: 13550 - Hypothetical Protein, at 91,915 to 92,880 13550

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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89,770 - 13548 mRNA_5180 0.76 +0.7
90,074 - 13548 mRNA_5180 0.87 -0.6
90,373 + -0.4
90,643 + -1.7
90,965 - 13549 mRNA_5181 0.39 -0.5
91,291 - +0.5
91,382 + -0.6
91,440 - +0.9
91,511 + -0.0
91,516 + +0.1
91,831 + -0.2
91,834 - +1.7
91,838 + +0.1
91,997 - -0.2
92,100 + 13550 mRNA_5182 0.19 -2.4

Or see this region's nucleotide sequence