Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5256

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_5256: 13624 - SUPERFAMILY--SSF53448, at 292,144 to 293,863 13624

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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291,455 + +0.7
291,587 - -0.5
291,589 + -1.6
291,602 + -1.5
291,727 - +0.7
291,745 + +0.5
291,745 + -1.4
291,747 + +1.1
291,753 + -2.8
291,754 + -0.7
291,756 - +0.8
291,757 + +1.5
291,758 - +0.1
291,826 + -1.3
291,835 + +1.0
291,923 - +0.4
292,115 - -0.7
292,130 + -0.8
292,286 + -0.2
292,699 - 13624 mRNA_5256 0.32 -0.5
293,052 - 13624 mRNA_5256 0.53 -0.8
293,080 + 13624 mRNA_5256 0.54 -2.8
293,460 + 13624 mRNA_5256 0.77 +0.2
293,631 - 13624 mRNA_5256 0.86 +0.7
294,099 - -0.8
294,199 + -0.6
294,365 + -1.4
294,376 + -0.2
294,509 + +1.3
294,514 + -0.1
294,534 + +0.1
294,672 + +0.9
294,679 + +0.1
294,686 + +1.0
294,692 + +0.1
294,696 + +0.5
294,700 + -0.3
294,700 - +0.2
294,725 + -0.3
294,797 + -0.6
294,861 + +0.6

Or see this region's nucleotide sequence