Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5415

Experiment: Sorted High BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_5415: 13783 - HMMPfam-Tyrosyl-DNA phosphodiesterase-PF06087,SUPERFAMILY--SSF56024, at 48,943 to 50,652 13783

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
remove
48,073 + -0.3
48,165 - +1.3
48,654 - -0.9
48,833 - +0.4
49,268 - 13783 mRNA_5415 0.19 +0.7
49,277 - 13783 mRNA_5415 0.20 +0.3
49,284 + 13783 mRNA_5415 0.20 -0.1
49,500 + 13783 mRNA_5415 0.33 +1.2
49,530 - 13783 mRNA_5415 0.34 -0.9
49,674 - 13783 mRNA_5415 0.43 -0.8
49,763 - 13783 mRNA_5415 0.48 +0.9
49,763 - 13783 mRNA_5415 0.48 +1.8
50,181 - 13783 mRNA_5415 0.72 -3.2
50,358 - 13783 mRNA_5415 0.83 +0.3
50,442 - 13783 mRNA_5415 0.88 -1.1
50,461 + 13783 mRNA_5415 0.89 -0.8
50,568 - -1.4
50,587 + +0.1
50,626 + -0.2
50,753 + +0.5
50,753 + -1.8
50,771 + -1.4
50,773 + -0.9
50,774 - -0.2
50,775 - -2.0
50,894 - -0.2
50,897 - +0.0
50,901 - -0.8
50,908 + -0.2
50,924 + -0.4

Or see this region's nucleotide sequence