Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5466

Experiment: Sorted High BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13833 and 13834 are separated by 203 nucleotides mRNA_5465: 13833 - Hypothetical Protein, at 156,189 to 157,604 13833 mRNA_5466: 13834 - K05841 E2.4.1.173 sterol 3beta-glucosyltransferase, at 157,808 to 163,476 13834

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
remove
157,124 - 13833 mRNA_5465 0.66 -0.7
157,294 + 13833 mRNA_5465 0.78 -0.4
157,560 - +0.4
157,561 + +0.5
158,158 + -2.4
158,223 - -1.7
158,350 + -3.0
158,450 + 13834 mRNA_5466 0.11 -1.6
158,683 + 13834 mRNA_5466 0.15 -2.0
158,807 - 13834 mRNA_5466 0.18 +0.6
158,870 + 13834 mRNA_5466 0.19 +0.2
159,108 - 13834 mRNA_5466 0.23 -1.3
159,158 - 13834 mRNA_5466 0.24 -0.8
159,233 + 13834 mRNA_5466 0.25 -0.9
159,246 + 13834 mRNA_5466 0.25 -0.4
159,326 + 13834 mRNA_5466 0.27 -2.2
159,530 - 13834 mRNA_5466 0.30 -0.4
159,707 - 13834 mRNA_5466 0.33 -4.2
159,892 - 13834 mRNA_5466 0.37 -1.2
160,120 - 13834 mRNA_5466 0.41 +0.9
160,298 - 13834 mRNA_5466 0.44 +0.6
160,319 + 13834 mRNA_5466 0.44 -0.3
160,396 - 13834 mRNA_5466 0.46 -0.0
161,096 + 13834 mRNA_5466 0.58 -0.5
161,171 - 13834 mRNA_5466 0.59 -0.1
161,203 + 13834 mRNA_5466 0.60 -1.3
161,330 - 13834 mRNA_5466 0.62 +0.4
161,457 + 13834 mRNA_5466 0.64 -2.3
161,478 + 13834 mRNA_5466 0.65 +0.3
161,599 - 13834 mRNA_5466 0.67 +1.4
161,798 - 13834 mRNA_5466 0.70 -1.0
161,804 + 13834 mRNA_5466 0.70 -2.5
161,816 + 13834 mRNA_5466 0.71 -0.5
162,046 + 13834 mRNA_5466 0.75 -0.6
162,061 + 13834 mRNA_5466 0.75 +0.8
162,102 + 13834 mRNA_5466 0.76 +0.5
162,387 - 13834 mRNA_5466 0.81 +1.4
162,938 - -1.0
163,068 + +0.6
163,075 + +0.4
163,119 + +1.8
163,220 + +0.5
163,377 - +0.0
163,385 - +0.6
163,386 + +0.4
163,413 - -1.3
163,479 - -0.3
163,521 + +0.6
163,523 + +0.4
163,676 + -0.7
163,680 + -0.5
163,692 + -1.5
163,699 + +1.8
163,809 + +1.5
163,818 + -3.4
163,831 + -1.9
163,835 - -0.3
163,855 - +0.1
163,857 - -1.3
163,863 + -0.9
163,943 - +0.5
163,961 + -1.7
163,992 + +1.3
163,997 + -0.2
163,998 + +0.2
164,407 - -0.1

Or see this region's nucleotide sequence