Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5710

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14077 and 14078 are separated by 569 nucleotides14078 and 14079 are separated by 202 nucleotides mRNA_5709: 14077 - K06647 MBP1 transcription factor MBP1, at 744,456 to 746,952 14077 mRNA_5710: 14078 - K03963 NDUFB7 NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 7, at 747,522 to 748,410 14078 mRNA_5711: 14079 - KOG4654 Uncharacterized conserved protein, at 748,613 to 751,704 14079

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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746,990 - -0.9
746,993 + +0.7
746,995 + -0.2
747,153 + +0.2
747,161 + -1.2
747,167 + +0.8
747,255 - -1.2
747,289 + -1.3
747,295 - +0.4
747,296 - +0.0
747,296 - +0.7
747,298 + -1.4
747,303 + +0.0
747,304 + -0.0
747,312 - -0.5
747,315 - -0.1
747,319 + -0.3
747,321 + -0.5
747,332 + +0.3
747,434 + -0.2
747,486 - -3.0
747,496 + -0.4
748,657 - -0.5
748,797 + -1.0
748,807 + -0.2
748,919 - -0.6
748,927 - 14079 mRNA_5711 0.10 -0.8
749,100 + 14079 mRNA_5711 0.16 +0.5

Or see this region's nucleotide sequence