Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5768

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14135 and 14136 are separated by 833 nucleotides mRNA_5767: 14135 - K02606 ORC4 origin recognition complex subunit 4, at 890,785 to 894,210 14135 mRNA_5768: 14136 - Hypothetical Protein, at 895,044 to 899,242 14136

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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894,316 - -0.5
894,321 - +1.6
894,366 + +0.3
894,375 - -2.9
894,483 + -2.9
894,672 + -0.5
894,676 - +1.1
894,960 + +0.6
895,054 + -1.9
895,111 - +0.2
895,231 - -1.3
895,815 - 14136 mRNA_5768 0.18 +0.1
895,937 - 14136 mRNA_5768 0.21 -2.3
895,956 + 14136 mRNA_5768 0.22 -1.1
896,136 - 14136 mRNA_5768 0.26 -1.5
896,258 - 14136 mRNA_5768 0.29 -0.1
896,413 + 14136 mRNA_5768 0.33 -0.2
896,865 + 14136 mRNA_5768 0.43 -2.6
897,105 - 14136 mRNA_5768 0.49 +0.0
897,144 + 14136 mRNA_5768 0.50 -0.9
897,734 - 14136 mRNA_5768 0.64 -0.5
897,855 - 14136 mRNA_5768 0.67 +0.6
897,903 - 14136 mRNA_5768 0.68 -1.8
898,060 - 14136 mRNA_5768 0.72 -1.8
898,776 - 14136 mRNA_5768 0.89 -0.9
898,838 - +1.3
898,924 + -1.8
898,943 + -0.6
899,187 - +0.4
899,207 + -1.8
899,272 + -0.4
899,521 - -0.0
899,546 + -1.3
900,216 - +0.4

Or see this region's nucleotide sequence