Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5897

Experiment: Sorted High BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14264 and 14265 are separated by 104 nucleotides mRNA_5896: 14264 - K07573 CSL4, EXOSC1 exosome complex component CSL4, at 1,191,974 to 1,192,832 14264 mRNA_5897: 14265 - Interpro Mitochondrial import receptor subunit or translocase, at 1,192,937 to 1,193,713 14265

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
remove
1,192,300 + 14264 mRNA_5896 0.38 -2.1
1,192,306 - 14264 mRNA_5896 0.39 +0.5
1,192,740 - 14264 mRNA_5896 0.89 -0.0
1,192,867 + -0.2
1,192,871 - -2.6
1,192,881 + +0.2
1,192,898 - +2.2
1,192,898 + +0.5
1,192,900 - -1.7
1,192,909 - -0.3
1,192,923 + -1.5
1,193,168 - 14265 mRNA_5897 0.30 -0.6
1,193,356 - 14265 mRNA_5897 0.54 +0.7
1,193,588 - 14265 mRNA_5897 0.84 -1.2
1,193,800 - -1.0
1,193,859 - -0.6
1,193,860 - +0.6
1,193,887 + -1.7
1,193,908 + -0.3
1,193,920 - -0.5
1,193,933 + +0.2
1,194,070 - -1.1
1,194,071 + -0.1
1,194,079 + +0.6
1,194,092 - -1.2
1,194,248 - -0.3
1,194,285 + -3.5
1,194,391 + +1.3
1,194,407 - +0.1
1,194,415 + -0.3

Or see this region's nucleotide sequence