Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6006

Experiment: Sorted High BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14373 and 14374 are separated by 328 nucleotides14374 and 14375 are separated by 243 nucleotides mRNA_6005: 14373 - Hypothetical Protein, at 1,436,776 to 1,437,486 14373 mRNA_6006: 14374 - Hypothetical Protein, at 1,437,815 to 1,438,982 14374 mRNA_6007: 14375 - Hypothetical Protein, at 1,439,226 to 1,440,523 14375

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
remove
1,436,823 + -2.3
1,436,845 + -0.4
1,436,965 - 14373 mRNA_6005 0.27 -0.9
1,437,453 + -2.4
1,437,876 - -0.2
1,437,923 - +0.1
1,438,005 - 14374 mRNA_6006 0.16 -0.7
1,438,284 - 14374 mRNA_6006 0.40 -2.6
1,438,351 + 14374 mRNA_6006 0.46 -1.1
1,438,408 + 14374 mRNA_6006 0.51 -2.0
1,438,760 - 14374 mRNA_6006 0.81 -0.7
1,438,764 - 14374 mRNA_6006 0.81 +0.2
1,438,881 - +0.3
1,438,907 + -0.2
1,438,928 - -0.0
1,439,011 - +0.0
1,439,063 - +0.1
1,439,211 + -0.5
1,439,235 + -0.2
1,439,259 - +0.1
1,439,478 - 14375 mRNA_6007 0.19 +0.1
1,439,481 - 14375 mRNA_6007 0.20 +1.8
1,439,728 - 14375 mRNA_6007 0.39 -0.2

Or see this region's nucleotide sequence