Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6126

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_6126: 14494 - Hypothetical Protein, at 65,217 to 65,741 14494

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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64,292 - -1.8
64,330 + -0.2
64,333 - -2.1
64,441 - -2.1
64,465 + +1.9
64,563 + +0.7
64,652 - -1.8
64,736 + -0.3
64,884 - -1.7
64,946 - -0.8
65,001 - -1.2
65,037 - -0.4
65,055 - +0.2
65,069 + +0.7
65,070 + -1.6
65,079 + -0.1
65,162 + -0.0
65,190 + +0.7
65,201 + -0.4
65,208 + -0.1
65,209 + +1.4
65,212 - -0.8
65,241 + -2.1
65,245 - -0.3
65,306 - 14494 mRNA_6126 0.17 +0.5
65,371 + 14494 mRNA_6126 0.29 +1.5
65,376 + 14494 mRNA_6126 0.30 -0.2
65,379 + 14494 mRNA_6126 0.31 +0.1
65,380 + 14494 mRNA_6126 0.31 -1.6
65,383 - 14494 mRNA_6126 0.32 -2.4
65,413 + 14494 mRNA_6126 0.37 +0.6
65,444 + 14494 mRNA_6126 0.43 -1.5
65,494 - 14494 mRNA_6126 0.53 -0.5
65,567 - 14494 mRNA_6126 0.67 +1.7
65,648 - 14494 mRNA_6126 0.82 +0.0
65,690 + +0.9
66,103 + -0.7
66,170 + -1.4
66,348 - -0.5
66,400 - +0.5
66,527 + +0.3
66,692 + -0.2
66,698 + +0.1
66,700 + -0.7
66,733 - +0.2

Or see this region's nucleotide sequence