Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6241

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14609 and 14610 are separated by 647 nucleotides mRNA_6241: 14609 - Hypothetical Protein, at 333,735 to 334,704 14609 mRNA_6242: 14610 - K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase, at 335,352 to 337,546 14610

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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332,817 - -0.4
332,910 - -2.6
333,145 + -0.2
333,148 - -0.6
333,174 + +0.0
333,260 + -0.0
333,304 - +0.4
333,305 + -0.3
333,315 + -0.1
333,342 - +1.5
333,344 - -1.5
333,354 - -0.8
333,356 + +0.8
333,436 - +0.4
333,469 - -0.2
333,495 + -1.7
333,508 + +0.0
333,557 + -0.9
333,565 + +0.2
333,573 - -0.3
333,578 - +0.7
333,580 - -1.2
333,584 - -3.6
333,590 - -0.6
333,592 - +0.4
333,594 - -2.2
333,600 - -1.8
333,602 + +0.0
333,604 + +0.2
333,606 + +0.5
333,607 + +0.3
333,613 - -2.9
333,619 - +1.8
333,623 - -2.1
333,629 + +0.9
333,629 + +0.4
333,629 + +0.4
333,633 - -1.9
333,643 - -0.6
333,646 + -0.4
333,771 - -0.6
333,772 - -2.2
333,782 - -0.4
333,800 + -0.4
333,808 - +0.3
333,951 - 14609 mRNA_6241 0.22 -1.9
333,961 + 14609 mRNA_6241 0.23 -0.6
333,963 + 14609 mRNA_6241 0.24 -0.3
333,976 - 14609 mRNA_6241 0.25 -1.3
334,089 + 14609 mRNA_6241 0.36 -0.9
334,104 - 14609 mRNA_6241 0.38 +0.2
334,114 + 14609 mRNA_6241 0.39 -1.4
334,261 + 14609 mRNA_6241 0.54 -2.0
334,402 + 14609 mRNA_6241 0.69 -1.8
334,534 - 14609 mRNA_6241 0.82 +0.6
334,682 + -0.8
334,682 - -1.4
334,705 + -3.1
334,938 + +0.1
335,105 - +0.2
335,214 + -1.3
335,268 - -0.0
335,289 - -0.4
335,292 + -1.3
335,384 + -0.5
335,432 - -0.2
335,433 + -2.2
335,494 + +0.5
335,574 - 14610 mRNA_6242 0.10 -0.7
335,597 + 14610 mRNA_6242 0.11 +0.3

Or see this region's nucleotide sequence