Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6418

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14785 and 14786 are separated by 267 nucleotides14786 and 14787 are separated by 416 nucleotides mRNA_6417: 14785 - Hypothetical Protein, at 758,941 to 760,073 14785 mRNA_6418: 14786 - K02127 ATPeF0B, ATP5F1, ATP4 F-type H+-transporting ATPase subunit b, at 760,341 to 761,286 14786 mRNA_6419: 14787 - KOG0744 AAA+-type ATPase, at 761,703 to 763,959 14787

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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759,381 + 14785 mRNA_6417 0.39 +1.2
759,568 - 14785 mRNA_6417 0.55 -0.9
759,866 - 14785 mRNA_6417 0.82 +1.6
759,875 - 14785 mRNA_6417 0.82 -1.2
759,998 - -1.2
760,187 - -0.9
760,275 - +1.4
760,293 - -0.8
760,295 - -0.0
760,296 + +1.8
760,297 - -0.3
760,307 + -0.1
760,307 + +1.2
760,308 - +0.1
760,333 + -0.8
761,322 - +0.3
761,531 + +0.4
761,633 + +2.1
761,662 - -0.9
761,775 + -0.8
761,814 - +0.1
762,180 - 14787 mRNA_6419 0.21 +0.3
762,210 + 14787 mRNA_6419 0.22 +0.1
762,269 + 14787 mRNA_6419 0.25 -0.1

Or see this region's nucleotide sequence