Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6479

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14847 and 14848 are separated by 505 nucleotides mRNA_6479: 14847 - K07378 NLGN neuroligin, at 888,957 to 890,595 14847 mRNA_6480: 14848 - Hypothetical Protein, at 891,101 to 891,716 14848

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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887,983 + +0.1
888,099 - -1.0
888,129 + -0.6
888,426 + +0.0
888,570 - +0.3
888,602 - -2.8
888,635 + +1.3
888,868 - +0.1
888,877 + -0.7
889,150 + 14847 mRNA_6479 0.12 -0.6
889,475 - 14847 mRNA_6479 0.32 -0.9
889,487 - 14847 mRNA_6479 0.32 -0.7
889,559 - 14847 mRNA_6479 0.37 -0.2
889,600 + 14847 mRNA_6479 0.39 +0.0
889,607 + 14847 mRNA_6479 0.40 -0.4
889,618 - 14847 mRNA_6479 0.40 -1.7
889,746 + 14847 mRNA_6479 0.48 -0.3
889,750 - 14847 mRNA_6479 0.48 +1.6
889,881 - 14847 mRNA_6479 0.56 -0.2
890,023 + 14847 mRNA_6479 0.65 +0.2
890,169 - 14847 mRNA_6479 0.74 +0.4
890,180 - 14847 mRNA_6479 0.75 -0.3
890,209 + 14847 mRNA_6479 0.76 +0.3
890,330 - 14847 mRNA_6479 0.84 +1.7
890,337 + 14847 mRNA_6479 0.84 +0.9
890,340 + 14847 mRNA_6479 0.84 -0.2
890,479 + +1.3
890,490 - -0.3
890,623 - -0.7
890,623 - -1.2
890,630 - +0.2
890,633 - +0.0
890,649 + -0.9
890,656 + -0.1
890,763 + +0.8
890,784 + -1.3
890,786 + -1.0
890,935 + +1.1
890,951 + +1.8
891,074 + -3.3
891,083 - -0.5
891,366 - 14848 mRNA_6480 0.43 +0.0

Or see this region's nucleotide sequence