Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6599

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14966 and 14967 are separated by 63 nucleotides mRNA_6598: 14966 - K11518 TOM40 mitochondrial import receptor subunit TOM40, at 1,192,910 to 1,194,373 14966 mRNA_6599: 14967 - Hypothetical Protein, at 1,194,437 to 1,195,925 14967

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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1,194,519 + -0.6
1,194,788 - 14967 mRNA_6599 0.24 +0.3
1,194,800 + 14967 mRNA_6599 0.24 -1.1
1,194,815 + 14967 mRNA_6599 0.25 -1.4
1,195,124 + 14967 mRNA_6599 0.46 +0.3
1,195,215 + 14967 mRNA_6599 0.52 -0.3
1,195,374 - 14967 mRNA_6599 0.63 -2.4
1,195,381 + 14967 mRNA_6599 0.63 -0.4
1,195,663 - 14967 mRNA_6599 0.82 -0.2
1,195,803 - +1.1
1,195,822 + -1.0
1,195,943 + -0.5
1,195,962 - -0.2
1,196,297 - -2.4
1,196,305 - -0.1
1,196,410 + +0.3
1,196,546 + -0.5
1,196,548 + -1.2
1,196,552 - +0.5
1,196,554 + -1.9
1,196,828 + -0.1
1,196,834 - -0.2

Or see this region's nucleotide sequence