Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6667

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15034 and 15035 are separated by 278 nucleotides15035 and 15036 are separated by 698 nucleotides mRNA_6666: 15034 - K18423 CSE1, CAS, XPO2 exportin-2 (importin alpha re-exporter), at 1,393,785 to 1,397,625 15034 mRNA_6667: 15035 - Hypothetical Protein, at 1,397,904 to 1,402,835 15035 mRNA_6668: 15036 - K03509 POLH DNA polymerase eta, at 1,403,534 to 1,406,837 15036

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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1,402,553 - -1.5
1,402,603 - -1.2
1,402,834 - -0.9
1,402,838 - -0.1
1,402,871 - +1.8
1,402,942 - -0.2
1,403,003 - -0.2
1,403,021 - -0.8
1,403,121 - +0.1
1,403,156 - -0.2
1,403,183 + +0.3
1,403,308 - -2.7
1,403,312 - +0.6
1,403,458 + -0.1
1,403,464 - -1.8
1,403,563 + +0.1
1,403,590 - -1.1
1,403,608 + -0.3

Or see this region's nucleotide sequence