Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6681

Experiment: Sorted High BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15048 and 15049 are separated by 735 nucleotides mRNA_6680: 15048 - K11430 EZH2 histone-lysine N-methyltransferase EZH2, at 1,427,504 to 1,431,076 15048 mRNA_6681: 15049 - Hypothetical Protein, at 1,431,812 to 1,432,661 15049

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
remove
1,431,075 - -2.4
1,431,092 + -0.9
1,431,102 + -0.5
1,431,244 - +1.1
1,431,247 - +0.2
1,431,251 + -0.4
1,431,391 - -0.4
1,431,391 + -1.0
1,431,401 + -2.0
1,431,671 + -1.4
1,431,823 - -0.5
1,431,836 - -0.7
1,431,975 - 15049 mRNA_6681 0.19 -0.9
1,431,993 + 15049 mRNA_6681 0.21 +1.1
1,431,994 - 15049 mRNA_6681 0.21 -1.9
1,432,114 - 15049 mRNA_6681 0.36 -2.2
1,432,274 + 15049 mRNA_6681 0.54 -0.2
1,432,416 - 15049 mRNA_6681 0.71 +0.4
1,432,425 + 15049 mRNA_6681 0.72 -2.9
1,432,431 - 15049 mRNA_6681 0.73 -1.2
1,432,450 - 15049 mRNA_6681 0.75 -0.2
1,432,465 - 15049 mRNA_6681 0.77 -0.8
1,432,549 - 15049 mRNA_6681 0.87 +0.6
1,432,580 + -1.2
1,432,591 + -0.6
1,432,601 - -1.2
1,432,601 + +1.2
1,432,636 + -0.2
1,432,726 - -1.4
1,432,727 + -0.5
1,432,732 + -0.6
1,432,739 + -0.0
1,432,742 + -0.7
1,432,781 + -1.1
1,432,797 + -0.9
1,432,815 - +0.8
1,432,828 + -1.4
1,432,886 - -0.2
1,432,889 + +0.2
1,432,894 + -0.7
1,432,902 + -0.2
1,432,903 - -0.2
1,432,913 + +0.1
1,433,018 + -0.4
1,433,033 + +1.3
1,433,037 + +0.2
1,433,173 - -1.4
1,433,313 - -2.0
1,433,334 + +0.6
1,433,469 + -0.8
1,433,625 + -1.7

Or see this region's nucleotide sequence