Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6725

Experiment: Sorted High BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15093 and 15094 are separated by 386 nucleotides mRNA_6725: 15093 - K07575 K07575 PUA domain protein, at 176 to 1,349 15093 mRNA_6726: 15094 - Hypothetical Protein, at 1,736 to 3,438 15094

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
remove
1 + +1.2
4 + -0.6
9 + -1.3
12 + +1.5
18 + +0.2
34 + -0.6
49 - -1.3
50 - -0.6
56 + -3.2
71 + -0.0
71 + -0.1
71 + +0.9
71 + +0.2
74 + -1.3
74 - +0.6
79 + -2.4
86 + +1.2
97 + -1.3
112 + -0.1
135 + -0.0
135 - -0.7
135 + +0.4
228 + -1.6
231 - -1.7
268 + +1.3
288 + -1.5
380 + 15093 mRNA_6725 0.17 -2.1
1,318 - -0.7
1,688 + -0.4
1,688 + -0.2
1,714 - -2.1
1,889 - -0.4
1,889 - +0.7
2,290 + 15094 mRNA_6726 0.33 -0.4
2,349 - 15094 mRNA_6726 0.36 -1.5

Or see this region's nucleotide sequence