Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6929

Experiment: Sorted High BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_6929: 15297 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 457,945 to 459,975 15297

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
remove
456,966 - -1.2
457,097 - -0.3
457,098 + -0.6
457,101 - -2.3
457,114 + -0.3
457,232 - -3.0
457,235 - -2.7
457,248 - -0.2
457,249 + -1.0
457,261 + -2.8
457,270 + -1.5
457,345 - +0.1
457,358 + +0.4
457,358 + +1.7
457,363 - +1.3
457,371 + +0.4
457,372 - -0.4
457,373 + +0.9
457,374 - -2.2
457,391 + +0.9
457,394 + +0.2
457,395 + -0.1
457,398 + -0.3
457,407 - -0.3
457,409 - -0.5
457,424 - -0.4
457,431 + -0.0
457,433 - -0.4
457,434 + +0.1
457,436 - +0.4
457,439 - +0.4
457,440 + +1.0
457,441 + -1.9
457,441 - -0.1
457,441 + -0.2
457,441 + +0.6
457,443 + -1.2
457,451 - -3.0
457,464 - +1.1
457,467 + -0.8
457,525 - -0.8
457,575 + +0.0
457,577 - -0.1
457,703 - -1.4
457,724 - -0.4
457,731 + +0.2
457,733 - +0.2
457,733 - +1.0
457,734 + -0.6
457,744 - -1.1
457,751 + -0.1
458,170 - 15297 mRNA_6929 0.11 -2.9
458,183 + 15297 mRNA_6929 0.12 -0.1
458,506 - 15297 mRNA_6929 0.28 -2.2
458,661 + 15297 mRNA_6929 0.35 -0.4
459,028 + 15297 mRNA_6929 0.53 +0.3
459,139 - 15297 mRNA_6929 0.59 -0.1
459,657 + 15297 mRNA_6929 0.84 -1.7
459,792 - +0.4
459,801 + +1.1
459,860 - +0.2
460,068 + -0.7
460,070 - -0.9
460,110 - -2.1
460,112 + -0.5
460,259 - -2.8
460,440 + +0.6
460,481 + +0.1
460,541 + -0.4
460,558 + -0.3
460,662 - -0.6

Or see this region's nucleotide sequence