Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6957

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15324 and 15325 are separated by 113 nucleotides mRNA_6956: 15324 - K00720 UGCG ceramide glucosyltransferase, at 528,007 to 529,680 15324 mRNA_6957: 15325 - K13100 CWC22 pre-mRNA-splicing factor CWC22, at 529,794 to 532,653 15325

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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528,824 + 15324 mRNA_6956 0.49 -3.0
528,851 + 15324 mRNA_6956 0.50 -0.2
528,860 - 15324 mRNA_6956 0.51 -0.6
529,572 + -1.8
529,724 - -1.3
529,727 - -0.3
529,737 + -0.7
529,752 + -0.6
532,678 - -0.5
532,799 + -1.2
532,816 + -0.3
532,879 + +1.8
532,913 - -0.8
532,924 + -2.6
532,926 + +0.5
532,933 + +0.5
532,935 - +0.1
532,936 - -0.2
532,949 + -0.4
532,950 + -0.3
533,036 + +0.1
533,068 + -0.3
533,092 + -1.0
533,098 - +0.9
533,121 + -0.1
533,134 + +0.8
533,159 - -0.2
533,171 + -0.9
533,173 - -0.2
533,174 + -0.7
533,212 + -0.8
533,223 + +0.2
533,224 - -1.8
533,245 - -0.3
533,357 + -1.3
533,376 + +0.3
533,380 + +0.3
533,380 - +0.4
533,383 - -1.7
533,384 + -2.9
533,391 + -2.4
533,395 + -0.1
533,398 - +1.5
533,408 + +0.7
533,408 + +0.1
533,409 + -2.3
533,409 + +0.9
533,409 + -1.1
533,429 - +1.5
533,431 + -0.6
533,432 + -1.8
533,433 - -1.4
533,439 - +0.4
533,446 + -0.0
533,483 + -0.1
533,484 - -1.4
533,485 + +0.6
533,493 - -0.7
533,507 - -0.4
533,514 + -0.7
533,514 - -1.1
533,515 - +0.5
533,522 + -2.3
533,524 - -2.0
533,526 - -0.8

Or see this region's nucleotide sequence