Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7002

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15369 and 15370 are separated by 198 nucleotides mRNA_7001: 15369 - KOG0566 Inositol-1,4,5-triphosphate 5-phosphatase (synaptojanin), INP51/INP52/INP53 family, at 642,201 to 644,311 15369 mRNA_7002: 15370 - Hypothetical Protein, at 644,510 to 646,069 15370

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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643,799 - 15369 mRNA_7001 0.76 +0.4
643,910 - 15369 mRNA_7001 0.81 +0.5
643,983 - 15369 mRNA_7001 0.84 -0.4
644,102 - -0.5
644,227 - +0.2
644,399 + -1.7
644,516 - -0.6
644,549 - -0.1
644,686 - 15370 mRNA_7002 0.11 -0.7
644,689 + 15370 mRNA_7002 0.11 -0.0
644,695 - 15370 mRNA_7002 0.12 +0.1
644,699 - 15370 mRNA_7002 0.12 +0.7
644,700 + 15370 mRNA_7002 0.12 +0.7
644,704 + 15370 mRNA_7002 0.12 -0.1
644,706 + 15370 mRNA_7002 0.13 +1.8
644,714 - 15370 mRNA_7002 0.13 -1.4
644,718 + 15370 mRNA_7002 0.13 +2.4
644,722 + 15370 mRNA_7002 0.14 +2.7
644,840 - 15370 mRNA_7002 0.21 -1.1
644,848 - 15370 mRNA_7002 0.22 +0.7
644,869 - 15370 mRNA_7002 0.23 +1.1
644,873 - 15370 mRNA_7002 0.23 +1.1
644,972 + 15370 mRNA_7002 0.30 -0.1
644,994 - 15370 mRNA_7002 0.31 -1.0
645,013 + 15370 mRNA_7002 0.32 +1.8
645,019 + 15370 mRNA_7002 0.33 -0.2
645,026 + 15370 mRNA_7002 0.33 +0.0
645,164 + 15370 mRNA_7002 0.42 -0.4
645,422 + 15370 mRNA_7002 0.58 -1.2
645,461 + 15370 mRNA_7002 0.61 -0.1
645,576 - 15370 mRNA_7002 0.68 +0.2
645,709 + 15370 mRNA_7002 0.77 -1.5
645,717 + 15370 mRNA_7002 0.77 -0.4
645,732 + 15370 mRNA_7002 0.78 -0.7
646,005 - -1.8
646,028 + -0.6
646,035 + -2.5
646,056 - -0.1
646,214 - +0.6
646,214 + +0.4
646,219 + -1.0
646,226 - -1.5
646,238 + -1.3
646,338 + +1.1
646,370 - -1.2
646,377 + +0.1
646,390 + -0.3
646,484 - +0.3
646,553 + +1.9

Or see this region's nucleotide sequence