Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7556

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15923 and 15924 are separated by 350 nucleotides15924 and 15925 are separated by 101 nucleotides mRNA_7555: 15923 - K00463 IDO, INDO indoleamine 2,3-dioxygenase, at 552,807 to 554,579 15923 mRNA_7556: 15924 - K12734 PPIL3 peptidyl-prolyl cis-trans isomerase-like 3, at 554,930 to 556,179 15924 mRNA_7557: 15925 - Hypothetical Protein, at 556,281 to 558,919 15925

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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554,056 - 15923 mRNA_7555 0.70 -1.0
554,195 - 15923 mRNA_7555 0.78 +0.7
554,231 + 15923 mRNA_7555 0.80 -1.7
554,501 - -0.1
554,503 - +1.5
554,648 + -0.0
554,655 - -1.0
554,671 - +0.4
554,777 + +0.0
554,799 + -0.8
554,812 - -0.2
554,819 + +0.1
554,819 + -0.4
554,822 - -0.2
554,832 + -0.6
554,851 + -1.0
554,997 - -2.0
555,257 - 15924 mRNA_7556 0.26 -0.2
555,421 + 15924 mRNA_7556 0.39 -1.2
555,695 - 15924 mRNA_7556 0.61 -0.7
556,003 + 15924 mRNA_7556 0.86 +1.7
556,285 + -0.5
556,291 - -1.3
556,299 + -0.1
556,435 - -0.6
556,481 + +0.1
557,157 + 15925 mRNA_7557 0.33 -0.0

Or see this region's nucleotide sequence