Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7568

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15935 and 15936 are separated by 829 nucleotides mRNA_7567: 15935 - KOG2290 Rhomboid family proteins, at 583,237 to 585,869 15935 mRNA_7568: 15936 - K18753 ZFP36L butyrate response factor 1, at 586,699 to 589,279 15936

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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588,473 - 15936 mRNA_7568 0.69 +0.4
589,038 - -1.7
589,043 - +0.2

Or see this region's nucleotide sequence