Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7617

Experiment: Sorted High BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15984 and 15985 are separated by 597 nucleotides mRNA_7616: 15984 - K00706 E2.4.1.34 1,3-beta-glucan synthase, at 684,881 to 690,807 15984 mRNA_7617: 15985 - Hypothetical Protein, at 691,405 to 692,628 15985

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
remove
690,893 + -1.8
691,065 + -0.2
691,073 - -0.3
691,101 + -0.6
691,114 + -0.8
691,164 - -0.0
691,185 + -0.1
691,220 + -1.6
691,239 - +0.5
691,264 + -0.4
691,265 - +0.1
691,354 - +0.6
691,369 - -0.4
691,469 + -1.0
691,629 + 15985 mRNA_7617 0.18 -1.0
691,715 + 15985 mRNA_7617 0.25 -2.3
691,735 + 15985 mRNA_7617 0.27 +0.3
691,799 - 15985 mRNA_7617 0.32 -2.8
691,808 - 15985 mRNA_7617 0.33 -0.2
691,831 + 15985 mRNA_7617 0.35 -0.1
692,003 + 15985 mRNA_7617 0.49 -2.3
692,039 - 15985 mRNA_7617 0.52 -1.6
692,183 - 15985 mRNA_7617 0.64 +0.2
692,245 + 15985 mRNA_7617 0.69 -0.5
692,461 + 15985 mRNA_7617 0.86 +0.4
692,508 - +0.3
692,619 + -0.0
692,629 + -0.1
692,637 + +0.0
692,752 + +0.2
692,764 - -0.6
692,775 + -2.4
692,781 - -0.3
692,783 - -0.4
692,791 - +0.5
692,796 - -0.7
692,806 + -2.8
692,806 + -0.5
692,815 + -0.7
692,818 - -1.2
692,820 - +0.0
692,822 + -1.0
692,822 - -0.3
692,824 + -0.9
692,824 - -0.1
692,830 + +0.5
692,831 + -0.1
692,831 + -0.5
692,836 + +0.0
692,837 + -0.5
692,839 + -0.6
692,841 - -1.4
692,844 - -2.4
692,846 - -1.1
692,847 + -3.2
692,851 + -0.2
692,851 + -1.9
692,851 + -0.2
692,853 - -0.2
692,853 - -2.2
692,853 + -0.5
692,869 + +1.9
692,869 + -0.0
692,877 + -1.9
692,880 - -1.4
692,888 + +0.7
692,889 - +0.2
692,890 + -0.8
692,892 - -0.2
692,893 + -1.0
692,898 - +0.2
692,901 - +1.0
692,902 - +0.0
692,902 - -1.6
692,903 - +0.0
692,914 - -0.5
692,962 - -0.4
692,982 + +0.9
693,001 - +0.8
693,011 + +0.4
693,028 - -2.0
693,037 - -1.4
693,041 + +0.0
693,043 + -3.0
693,049 - -1.3
693,060 - +0.5
693,063 + +0.7
693,073 + +0.6
693,077 + -0.4
693,102 + -0.1
693,181 + -0.2
693,186 + -1.3
693,190 - -0.1
693,192 - -1.0
693,192 - -1.3
693,193 + -0.1
693,197 + +0.6
693,197 - +1.9
693,198 + -2.0
693,200 + +0.0
693,201 - -3.1
693,203 + -1.7
693,213 + +0.3
693,214 + +0.4
693,219 - -0.5
693,223 + -1.6
693,232 + +0.2
693,233 - -0.2
693,242 - -0.1
693,244 - -2.0
693,244 - +0.1
693,255 - -1.0
693,271 + -1.0
693,277 + -0.5
693,286 - -0.5
693,287 + +0.3
693,291 - -0.4
693,297 - +1.0
693,305 - +0.2
693,312 + +0.0
693,315 + +0.3
693,326 - -0.9
693,330 - -0.1
693,344 - -3.2
693,349 + -0.0
693,370 + +0.7
693,375 - -0.3
693,379 - +1.4
693,383 - -0.1
693,389 + -1.2
693,390 - +1.0
693,400 - +0.7
693,401 - +1.0
693,401 + -2.4
693,408 - -1.8
693,413 + -1.9
693,416 + -0.6
693,419 - +0.4
693,424 + +1.3
693,436 + +0.7
693,437 + -1.6
693,445 + +0.1
693,453 + -1.1
693,457 + -0.0
693,461 - -0.4
693,465 - -1.7
693,465 - +0.5
693,466 - -1.0
693,466 - +0.6
693,467 + +0.8
693,468 - +0.8
693,473 + -0.7
693,478 - -1.3
693,479 + -0.5
693,492 + +0.6
693,499 - +0.1
693,499 - +0.3
693,500 + -0.2
693,532 + -0.3
693,541 + -0.8
693,613 + +0.7

Or see this region's nucleotide sequence