Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7664

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16032 and 16033 are separated by 207 nucleotides mRNA_7664: 16032 - K07904 RAB11A Ras-related protein Rab-11A, at 794,964 to 796,238 16032 mRNA_7665: 16033 - K13119 FAM50, XAP5 protein FAM50, at 796,446 to 798,090 16033

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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793,968 - -0.1
793,977 - +0.6
793,994 + -1.3
794,005 + -2.0
794,006 - -0.3
794,008 - -0.6
794,009 + -0.6
794,034 + -0.1
794,035 + -1.2
794,037 + +0.4
794,053 + +0.4
794,058 + -1.7
794,071 - +0.4
794,074 + -0.0
794,077 - -1.2
794,078 + -0.2
794,081 + +0.2
794,082 + +0.0
794,093 - +0.6
794,096 - +0.6
794,098 - +0.0
794,104 + +0.8
794,105 - +0.1
794,115 + -2.1
794,117 + +0.9
794,122 - -1.5
794,122 - -1.8
794,123 - -0.1
794,127 - -0.6
794,130 + -2.1
794,134 + +0.5
794,135 - -1.8
794,136 - -0.1
794,138 + -0.6
794,141 + -0.3
794,152 - +0.0
794,155 + -1.3
794,161 + -0.5
794,162 - -0.4
794,164 - -0.5
794,164 - -0.1
794,165 - -0.1
794,167 - -0.1
794,168 + +0.5
794,174 + -0.2
794,175 + +0.9
794,177 - -0.3
794,177 + -1.4
794,179 - +0.0
794,180 - +0.4
794,180 - -0.3
794,182 + -0.7
794,184 + -0.1
794,185 + -0.3
794,185 - -0.0
794,186 + -1.3
794,187 - -0.9
794,187 - -0.1
794,202 - -0.7
794,203 + -3.0
794,203 + +0.1
794,203 - +0.0
794,204 + -0.1
794,206 + -1.1
794,209 + -1.5
794,210 - +0.6
794,223 - -1.2
794,227 - -1.2
794,227 + -0.5
794,229 + -0.0
794,230 - -0.5
794,233 + -0.0
794,233 - -0.5
794,236 - +0.4
794,237 + -0.3
794,238 + +0.3
794,240 - -0.2
794,245 - -1.1
794,245 - -0.9
794,248 + -0.6
794,248 - +0.5
794,252 - -0.8
794,253 - +0.7
794,259 - -0.3
794,259 + +0.5
794,261 + +1.1
794,262 + -0.0
794,265 + -0.4
794,267 - +0.6
794,278 - +1.4
794,281 - +1.7
794,283 + -0.1
794,292 + -1.3
794,372 + -1.0
794,396 + -0.1
794,418 + +1.2
794,422 + +1.5
794,427 + +0.1
794,447 + -0.8
794,453 - +1.6
794,459 + +0.4
794,496 - -0.7
794,517 - -0.7
794,521 - +0.7
794,525 + -1.8
794,529 + +0.2
794,542 - -0.1
794,555 + -0.1
794,556 + -1.2
794,558 + +0.2
794,561 - +0.5
794,563 + -0.6
794,568 + +0.3
794,575 + -0.5
794,576 - +0.4
794,578 - -0.9
794,596 + -0.7
794,597 + +0.4
794,620 + -0.0
794,624 - +0.7
794,689 + -0.1
794,697 - -0.4
794,697 - -0.1
794,703 - +0.5
794,703 + +0.3
794,715 - -0.0
794,722 - -3.0
794,727 - -0.6
794,732 - +0.7
794,737 - -1.7
794,747 + -0.4
794,751 - -0.6
794,761 + -0.0
794,766 + +0.5
794,769 + +1.0
794,771 + -0.7
794,888 + +0.2
794,891 + -0.5
794,959 - +1.5
795,574 - 16032 mRNA_7664 0.48 -2.5
796,342 + -1.6
796,352 - -1.0
796,358 - +0.0
796,359 + -2.2
796,359 - +0.5
796,367 - +1.2
796,376 + +0.5

Or see this region's nucleotide sequence